This function calculates the rarefaction AUC for a given rarefied richness table
Usage
RarefactionAUC(rarefied_richness, n_boot = 1000, seed = 513)
Arguments
- rarefied_richness
The rarefied richness object containing feature data, annotations, and pairwise comparisons
- n_boot
The number of bootstrap samples to use (default: 1000)
- seed
The seed to use for the bootstrap samples (default: 513)
Value
A list containing the rarefaction AUC for each group in the metadata, with columns for group and AUC
Examples
if (FALSE) {
RarefactionAUC(rarefied_richness, n_boot = 1000)
}