PlotFoldchangeResistanceQuad — PlotFoldchangeResistanceQuad • ecomet

This function plots the fold change resistance in a quadrant plot, categorizing points into quadrants based on their effect size and fold change. It also performs a binomial test to assess the distribution of points across quadrants.

Usage

PlotFoldchangeResistanceQuad(
  performance_regression,
  fold_change,
  color,
  output_dir,
  save_output = TRUE,
  width = 6,
  height = 6
)

Arguments

performance_regression: The regression results data frame containing effect size, fold change, and tag. The output from GetPerformanceFeatureRegression, GetPerformanceFeatureLMM, or GetPerformanceFeatureCorrelation.
fold_change: The name of the fold change column in the performance_regression dataframe
color: A vector of colors for the points in the plot
output_dir: The output file path for the quadrant plot
save_output: A logical value indicating whether to save the output plot (default: TRUE)
width: The width of the output plot in inches (default: 6)
height: The height of the output plot in inches (default: 6)

Value

A list containing the quadrant plot and the performance regression data frame