ExportFeaturesToCSV

This function exports selected features, their annotations, and pairwise comparisons to a CSV file.

Usage

ExportFeaturesToCSV(mmo, id_list, normalization = "None", output_dir)

Arguments

mmo

The mmo object containing feature data, annotations, and pairwise comparisons

id_list

A list of feature names to filter and export

normalization

The normalization method to use for feature data. Options are 'None', 'Log', 'Meancentered', or 'Z' (default: 'None')

output_dir

The output directory to save the CSV file

Examples

if (FALSE) {
ExportFeaturesToCSV(mmo,
                    id_list = Glucosinolates,
                     normalization = 'Z',
                     output_dir = 'output.csv')
ExportFeaturesToCSV(mmo, id_list = DAMs_up$control_vs_treatment1.up,
                         normalization = 'None',
                          output_dir = 'output.csv')
}